convert a tracks file into a map of the fraction of tracks to enter each voxel.
| -template image |
an image file to be used as a template for the output (the output image wil have the same transform and field of view).
| image |
the input template image |
|
| -vox size |
provide either an isotropic voxel size, or comma-separated list of 3 voxel dimensions.
| size |
the voxel size (in mm). |
|
| -colour |
add colour to the output image according to the direction of the tracks. |
| -fraction |
produce an image of the fraction of fibres through each voxel (as a proportion of the total number in the file), rather than the count. |
| -totalcount |
when using the -fraction option, compute fractions as proportion of total_count header entry rather than number of tracks in the file. This total_count corresponds to the total number of streamlines actually generated rather than those that were eventually selected. |
| -lstdi |
scale the contribution of each track to the density image by the inverse of the streamline length |
| -datatype spec |
specify output image data type.
| spec |
the data type specifier. |
|
| -resample factor |
resample the tracks at regular intervals using Hermite interpolation. If omitted, the program will select an appropriate interpolation factor automatically.
| factor |
the factor by which to resample. |
|
| -info |
display information messages. |
| -quiet |
do not display information messages or progress status. |
| -debug |
display debugging messages. |
| -help |
display this information page and exit. |
| -version |
display version information and exit. |
