estimate the fibre response function for use in spherical deconvolution.
-grad encoding |
specify the diffusion-weighted gradient scheme used in the acquisition. The program will normally attempt to use the encoding stored in image header.
encoding |
the gradient encoding, supplied as a 4xN text file with each line is in the format [ X Y Z b ], where [ X Y Z ] describe the direction of the applied gradient, and b gives the b-value in units (1000 s/mm^2). |
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-lmax order |
set the maximum harmonic order to be estimated. By default, the program will use the highest possible lmax given the number of diffusion-weighted images.
order |
the maximum harmonic order to use. |
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-normalise |
normalise the DW signal to the b=0 image |
-info |
display information messages. |
-quiet |
do not display information messages or progress status. |
-debug |
display debugging messages. |
-help |
display this information page and exit. |
-version |
display version information and exit. |