Each region-of-interest should be either the path to a binary mask image, or a comma-separated list of 4 floating-point values, specifying the [x,y,z] coordinates of the centre and radius of a spherical ROI.
| -include spec |
specify an inclusion region of interest. Tracks that enter ALL such inclusion ROI will be included.
| spec |
specifies the parameters necessary to define the ROI. |
|
| -exclude spec |
specify an exclusion region of interest. Tracks that enter ANY such exclusion ROI will NOT be included.
| spec |
specifies the parameters necessary to define the ROI. |
|
| -minlength value |
the minimum length of a track. Tracks shorter than this value will NOT be included.
| value |
the minimum length to use in mm. |
|
| -invert |
invert the matching process, so that tracks that would otherwise have been included are now excluded and vice-versa. |
| -nomaskinterp |
do NOT perform tri-linear interpolation of mask images. |
| -info |
display information messages. |
| -quiet |
do not display information messages or progress status. |
| -debug |
display debugging messages. |
| -help |
display this information page and exit. |
| -version |
display version information and exit. |
